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Bioinformatics Engineer

2 months ago

Cambridge, Massachusetts, United States Catalytic Data Science Full time
Job Description

About Catalytic Data Science

Catalytic Data Science is a pioneering cloud research and development platform designed to integrate vast scientific resources, data, and analytical tools in a secure and scalable environment. By enabling research and development teams to work more collaboratively and improving productivity company-wide, the Catalytic platform helps teams achieve key research milestones faster and with greater accuracy. Our customers are passionate about making the world a better place, and we are inspired by the opportunity to help them.

The Role

Catalytic is seeking a proactive, driven, and talented Bioinformatics Engineer who is motivated by the challenge to deliver highly available, secure, and scalable enterprise bioinformatics software. This mid-level position is a key member of our engineering team who will enable us to continuously deliver quality bioinformatics and visualization software. The ideal candidate would have experience securing, augmenting, and containerizing open-source analytics and visualization software for deployment on the Catalytic Platforms.

Key Responsibilities

  • Identify dependencies and containerize selected open-source analytics
  • Work with the Science team to determine inputs, outputs, and parameters of analytics
  • Collaborate with the UX/UI team to design clear interfaces to work seamlessly with back-end services
  • Test, troubleshoot, debug throughout the application development process, including assisting customers in determining causes of failed pipelines
  • Work closely with other backend engineers to improve all aspects of the analytics platform, including development, testing, error handling, cost and speed optimizations, usage reporting, etc.
  • Develop a high-level understanding of all parts of the platform and offer assistance when necessary

Requirements

  • BS in science, computer science, or related engineering or math discipline and 3+ years related work experience (or equivalent work experience in lieu of degree)
  • Experience containerizing (Docker) and securing open-source applications
  • Extensive experience with Python
  • Knowledge of R is a plus; knowledge in creating rShiny web apps is a double-plus
  • Knowledge of Java is a plus
  • Experience using Bash/Linux
  • Experience using Amazon Web Services
  • Excellent communication (written and verbal), time management, interpersonal, and team participation skills

What We Offer

In compliance with federal law, all persons hired will be required to verify identity and eligibility to work in the United States and to complete the required employment eligibility verification document form upon hire.