Microscopy Image Analysis Intern

4 weeks ago


Portland, Oregon, United States The Jackson Laboratory Full time

Job Summary

The Jackson Laboratory is seeking a highly motivated student intern to work on a project focused on analyzing biomedical images using deep learning techniques. The intern will work under the supervision of a Sr. Scientific Software Engineer and will be responsible for annotating data, applying state-of-the-art deep learning methods, and developing a scalable and reproducible image analysis framework.

Key Responsibilities

  • Work closely with researchers to annotate data and create a training dataset.
  • Apply state-of-the-art deep learning techniques, including transfer learning, to create task-specific models.
  • Scale transfer learning to operate on Whole Slide Images (WSI) using parallelization.
  • Develop a strategy to apply the probability output of deep learning networks to find high probable regions of interest.
  • Generate a training set based on the CS/MS group's specifications and use JAX HPC resources to retrain all weights of the full network.

About The Jackson Laboratory

The Jackson Laboratory is an independent, nonprofit biomedical research institution with a National Cancer Institute-designated Cancer Center. Its mission is to discover precise genomic solutions for disease and empower the global biomedical community in the shared quest to improve human health.



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