Staff/Sr. Staff Software Engineer, GPU and Acceleration Expert

3 weeks ago


Pleasanton, Kansas, United States SequLITE Genomics US, Inc. Full time

SequLITE Genomics US, Inc. is a leading life science company developing an NGS platform to enable sequencing for everyone.

We are seeking a highly skilled Staff/Sr. Staff Software Engineer, GPU and Acceleration to join our product development team.

The successful candidate will be responsible for leading the design, development, and optimization of image processing and basecall algorithms and software solutions tailored for NGS platforms.

The position will involve collaborating closely with cross-functional teams to integrate advanced imaging capabilities into our NGS systems, enabling high-throughput sequencing and analysis.

Key Responsibilities:

  • Lead the design and implementation of real-time image processing and basecall algorithms and software solutions to support NGS workflows, including image acquisition, quality control, and data analysis.
  • Collaborate with hardware engineers to optimize imaging systems for high-throughput sequencing applications.
  • Conduct performance analysis and optimization of image processing algorithms to enhance accuracy, efficiency, and scalability.
  • Stay current with the latest advancements in image processing, computer vision, and machine learning technologies, and apply cutting-edge techniques to solve challenges in NGS.
  • Mentor and guide junior engineers, providing technical leadership and fostering a culture of innovation and excellence.
  • Collaborate with product management and customer-facing teams to understand customer requirements and translate them into technical specifications.
  • Contribute to the development of tools, frameworks, and libraries to support image processing workflows and enhance developer productivity.

Requirements:

  • Master's, or Ph.D. degree in Computer Science, Electrical Engineering, Bioinformatics, Computational Biology, Statistics, Physics, Mathematics, or a related field.
  • Fluency and extensive experience (10+ years) in real-time C++ programming: Expertise in writing efficient, reliable, and maintainable C++ code for real-time processing.
  • Highly experienced (7+ years) with CUDA programming on high-end platforms.
  • Experience with UNIX / POSIX programming, Windows and cross-compatible platforms.

Preferred Qualifications:

  • Relevant experience in image processing, and/or machine learning, with a focus on applications in the life sciences.
  • Relevant experience in base calling algorithms.
  • Good knowledge of data structure, data compression, and data I/O pipelining.
  • Proficiency in other programming languages such as Python, Rust or C# is a plus.

What We Offer:

  • Financial security through competitive compensation, incentives, and retirement plan.
  • Health care and well-being programs including competitive medical, dental, vision & medical benefits.
  • Generous paid time off including vacation, sick time, holidays.
  • 401(k) retirement savings with company match.
  • Other comprehensive voluntary benefits include but are not limited to pet insurance, life insurance, employee assistance program (EAP), discount programs, and many more.


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