Scientist I, Bioinformatics
2 weeks ago
The Scientist I, Bioinformatics works closely with several groups within Sarepta’s Research and Development department. The Scientist I, Bioinformatics is part of the Genomics and Data Sciences team and plays a critical role in supporting Discovery Biology to advance our portfolio of RNA, gene therapy, and CRISPR-based gene editing therapies to treat neuromuscular and CNS-related disease. As such, this person is expected to communicate effectively with diverse stakeholders across the organization.
Primary Responsibilities Include:
- Develop and optimize bioinformatic analysis pipelines ensuring high maintainability and performance.
- Establish automatized solutions to store analysis results and associated pipeline metadata to facilitate extraction/reporting/visualization of information.
- Develop software validation procedures and test plans, as necessary.
- Deploy pipelines using scalable cloud solutions to accommodate increasing data footprint.
- Proactively identify opportunities/technologies for process improvement and implement enhancements to maximize efficiency in the data processing.
Desired Education and Skills:
- MS degree in Biomedical engineering, Computer Science, Computational Biology, or Bioinformatics, with at least 3 years of relevant experience. Industry experience is highly desirable.
- Excellent communication skills and the ability to converse successfully with interdisciplinary collaborators from diverse backgrounds, and experience with multidisciplinary teamwork.
- Expertise in Python is required, as well as experience with shell and R scripting.
- Previous work experience with NGS (Next Generation Sequencing) data sets. Having exposure to the essentials of genomics, genetics, and molecular biology is desirable.
- A record of accomplishment developing software solutions in a scientific or research context.
- Experience integrating pipelines with databases/data lake solutions is desirable.
- Experience with workflow management languages such as Nextflow, Snakemake (or similar) frameworks and pipeline orchestration tools (e.g., Airflow, Dagster) to support scalable and reproducible research pipelines.
- Understanding best practices across the entire software development lifecycle (SDLC) with experience with a git SaaS like GitHub/GitLab.
- Understanding of cloud computing best-practices to deploy large-scale informatics production solutions in the cloud (e.g., AWS). Examples include automation, CI/CD, containerization (e.g., Docker, Kubernetes), monitoring, and incident management.
- Recognized by former peers, colleagues, managers for attributes congruent with Sarepta values: Drive, Excellence, Resilience, Teamwork, Innovation and Compassion.
- Location is flexible within the US.
LI-Remote
This position is remote. However, you will be expected to work on site at one of Sarepta's facilities in the United States and/or attend Company-sponsored in-person events from time to time.
The targeted salary range for this position is $96,000 - $120,000 per year. Sarepta is making a good faith effort to be transparent and accurate around our hiring ranges. The salary offer is commensurate with Sarepta’s compensation philosophy and considers factors including, but not limited to, education, training, experience, external market conditions, criticality of role, and internal equity.
Sarepta Therapeutics offers a competitive compensation and benefit package.
Sarepta Therapeutics is an Equal Opportunity/Affirmative Action employer and participates in e-Verify.
-
Bioinformatics Scientist
1 month ago
Cambridge, United States Raytheon Technologies Corporate Headquarters Full timeDate Posted: 2024-05-17 Country: United States of America Location: MA105: BBN Headquarters 10 Moulton Street , Cambridge, MA, 02138 USA Position Role Type: Remote RTX BBN Technologies, a subsidiary of RTX Corporation, is the research company behind many revolutionary advances that we take for granted today. BBN is where email was invented, and the first...
-
Sr. Bioinformatics Scientist
1 month ago
Cambridge, United States Catalytic Data Science Full timeJob DescriptionJob DescriptionSalary: Sr. Bioinformatics Scientist About Catalytic Data Science (CDS): REMOTE OPPORTUNITY Catalytic Data Science is a groundbreaking cloud R&D platform designed to integrate the volumes of scientific resources, data, and analytic tools while providing the ability to network with colleagues in one secure and scalable...
-
Sr. Bioinformatics Scientist
4 weeks ago
Cambridge, United States Catalytic Data Science Full timeJob DescriptionJob DescriptionSalary: Sr. Bioinformatics Scientist About Catalytic Data Science (CDS): REMOTE OPPORTUNITY Catalytic Data Science is a groundbreaking cloud R&D platform designed to integrate the volumes of scientific resources, data, and analytic tools while providing the ability to network with colleagues in one secure and scalable...
-
Sr. Bioinformatics Scientist
4 weeks ago
Cambridge, United States Catalytic Data Science Full timeJob DescriptionJob DescriptionSalary: Sr. Bioinformatics Scientist About Catalytic Data Science (CDS): REMOTE OPPORTUNITY Catalytic Data Science is a groundbreaking cloud R&D platform designed to integrate the volumes of scientific resources, data, and analytic tools while providing the ability to network with colleagues in one secure and scalable...
-
Bioinformatics Research Technician
1 month ago
Cambridge, United States Massachusetts General Hospital(MGH) Full timeGENERAL SUMMARY/ OVERVIEW STATEMENT: The Kwon Laboratory at the Ragon Institute of MGH, MIT, and Harvard at the Massachusetts General Hospital in Boston (www.kwonlab.org) is seeking a highly motivated and experienced Bioinformatics Research Technician for a two-year commitment to join our team in studying the vaginal microbiome and vaginal mucosal...
-
Bioinformatics Research Technician
4 weeks ago
Cambridge, United States Massachusetts General Hospital(MGH) Full timeGENERAL SUMMARY/ OVERVIEW STATEMENT: The Kwon Laboratory at the Ragon Institute of MGH, MIT, and Harvard at the Massachusetts General Hospital in Boston (www.kwonlab.org) is seeking a highly motivated and experienced Bioinformatics Research Technician for a two-year commitment to join our team in studying the vaginal microbiome and vaginal mucosal...
-
Bioinformatics Research Technician
3 weeks ago
Cambridge, United States Massachusetts General Hospital(MGH) Full timeGENERAL SUMMARY/ OVERVIEW STATEMENT: The Kwon Laboratory at the Ragon Institute of MGH, MIT, and Harvard at the Massachusetts General Hospital in Boston (www.kwonlab.org) is seeking a highly motivated and experienced Bioinformatics Research Technician for a two-year commitment to join our team in studying the vaginal microbiome and vaginal mucosal...
-
Cambridge, United States Moderna, Inc. Full timeThe Role:As part of our vision, Moderna is committed to invest in R&D to further expand our impact on patients. You will be part of a growing team in Clinical and Translational Computational Oncology in R&D. The group will be focused on mining the multi-omics data obtained from clinical samples, understanding how the data can explain, predicting clinical...
-
Cambridge, United States Moderna, Inc. Full timeThe Role:As part of our vision, Moderna is committed to invest in R&D to further expand our impact on patients. You will be part of a growing team in Clinical and Translational Computational Oncology in R&D. The group will be focused on mining the multi-omics data obtained from clinical samples, understanding how the data can explain, predicting clinical...
-
Cambridge, Massachusetts, United States Moderna, Inc. Full timeThe Role:As part of our vision, Moderna is committed to invest in R&D to further expand our impact on patients. You will be part of a growing team in Clinical and Translational Computational Oncology in R&D. The group will be focused on mining the multi-omics data obtained from clinical samples, understanding how the data can explain, predicting clinical...
-
Cambridge, Massachusetts, United States Moderna, Inc. Full timeThe Role:As part of our vision, Moderna is committed to invest in R&D to further expand our impact on patients. You will be part of a growing team in Clinical and Translational Computational Oncology in R&D. The group will be focused on mining the multi-omics data obtained from clinical samples, understanding how the data can explain, predicting clinical...
-
Cambridge, Massachusetts, United States Moderna, Inc. Full timeThe Role:As part of our vision, Moderna is committed to invest in R&D to further expand our impact on patients. You will be part of a growing team in Clinical and Translational Computational Oncology in R&D. The group will be focused on mining the multi-omics data obtained from clinical samples, understanding how the data can explain, predicting clinical...
-
Scientist, Oncology Bioinformatics, INT Omics
1 month ago
Cambridge, Massachusetts, United States Moderna, Inc. Full timeThe Role:Moderna is seeking a highly motivated bioinformatician with solid training in cancer genomics data analysis to work as part of a highly collaborative, multi-disciplinary, and fast-paced team. The primary focus for this position is to curate and evaluate cancer specific genomic aberrations and immune evasion mechanisms, translate public and...
-
Scientist, Oncology Bioinformatics, INT Omics
4 weeks ago
Cambridge, Massachusetts, United States Moderna, Inc. Full timeThe Role:Moderna is seeking a highly motivated bioinformatician with solid training in cancer genomics data analysis to work as part of a highly collaborative, multi-disciplinary, and fast-paced team. The primary focus for this position is to curate and evaluate cancer specific genomic aberrations and immune evasion mechanisms, translate public and...
-
Scientist/Principal Scientist, Data Science
1 month ago
Cambridge, United States Matchpoint Therapeutics Full timeMatchpoint is a biotechnology company harnessing the power of covalency to discover precision covalent medicines to transform the treatment of immune diseases and other serious illnesses. The company's proprietary Advanced Covalent Exploration (ACE) platform integrates advanced chemoproteomics, machine learning and covalent chemistry library evolution....
-
Scientist/Principal Scientist, Data Science
4 weeks ago
Cambridge, United States Matchpoint Therapeutics Full timeMatchpoint is a biotechnology company harnessing the power of covalency to discover precision covalent medicines to transform the treatment of immune diseases and other serious illnesses. The company's proprietary Advanced Covalent Exploration (ACE) platform integrates advanced chemoproteomics, machine learning and covalent chemistry library evolution....
-
Principal Scientist, Immunopeptidomics
7 days ago
Cambridge, United States Johnson & Johnson Full timeJohnson and Johnson is recruiting for a **Principal Scientist, Immunopeptidomics & Proteomics **for our site located in Cambridge, MA. **Primary responsibilities**: - Manage a team of wet lab scientists enabling proteomic insights across a wide variety of programs and therapeutic modalities. - Plan, oversee and perform wet lab proteomic activities for...
-
Cambridge, Massachusetts, United States Moderna, Inc. Full timeThe Role:Moderna is seeking a highly motivated and experienced computational scientist with immunoinformatics background to join our collaborative, multi-disciplinary, and fast-paced team dedicated to the development of cancer immunotherapies. The primary focus of this role is to develop leading-edge computational methods that translates complex immunology...
-
Cambridge, United States Moderna, Inc. Full timeThe Role:Moderna is seeking a highly motivated and experienced computational scientist with immunoinformatics background to join our collaborative, multi-disciplinary, and fast-paced team dedicated to the development of cancer immunotherapies. The primary focus of this role is to develop leading-edge computational methods that translates complex immunology...
-
Cambridge, Massachusetts, United States Moderna, Inc. Full timeThe Role:Moderna is seeking a highly motivated and experienced computational scientist with immunoinformatics background to join our collaborative, multi-disciplinary, and fast-paced team dedicated to the development of cancer immunotherapies. The primary focus of this role is to develop leading-edge computational methods that translates complex immunology...
