Data Scientist, Translational Data Science

2 weeks ago

Cambridge, United States HiFiBio Therapeutics Full time
Job DescriptionJob Description

We are seeking a highly motivated, flexible hands-on Data Scientist (Principal Scientist) to join our growing Translational Data Science team within the Translational Medicine organization. You will be at the center of our desire to use clinical, biomarker, and single cell data to bring forward new medicines in autoimmune disease and cancer. You will leverage your creativity and analytical thinking to develop and to apply computational methods and AI/ML techniques to advance both our clinical and research programs. Your work will help us gain actionable insight from our high dimensional and multi-modal data and assess our biotherapeutics’ ability to modulate the immune repertoire. 

This is an on-site position in Cambridge, MA.
 

What you will do: 

Synthesize our data into actionable insights by supplying to the Translational teams any needed computational, statistical, machine learning or modeling capabilities needed to advance our clinical programs. Examples include: 

  • Computational strategies for disease endotyping from back-translational studies to identify and rank indications for first in-human-studies as well as identify actionable targets/combinations. 

  • Identification and qualification of biomarkers (e.g., selection, PD, efficacy biomarkers) and analysis of data from both our clinical and research effects 

  • Assessment of treatment effects from both RNA (e.g., bulk, single cell, TCR/BCR, and spatial) and protein modalities (e.g., CITE/REAP-Seq, mIF, and high dimensional flow cytometry  
     

Develop and apply computational, AI/ML methods to analyze our multi-modal data. Examples include: 

  • Best practices for single cell methods including data imputation and normalization, bulk deconvolution, cell type/state analysis, cell-cell interaction/trajectory inference, reconstruction of cell type specific interactomes – cellphoneDB and spatial transcriptomic analysis and visualization 

  • Pipelines for data processing and QC including visualization and integrative analysis (e.g., Nextflow, Python, shell scripts) including but not limited to quality control, alignment, variant calling, annotation, deconvolution, etc.  

  • Generative AI models to integrate and to analyze multi-modal molecular as well as patient clinical data 

  • Interactive dashboards for data visualization and interpretation 
     

What you will bring: 

  • Ph.D. in a computational, statistical, biophysics, or bioinformatics related fields  

  • A minimum of 5-years research (academia or industry) experience 

  • First-hand experience in single cell sequencing analysis and data generation methods as well as the computing infrastructure and data management methods  

  • First-hand multi-parametric data mining experience for disease endotyping, target identification and biomarker analysis. For example, multivariate analysis; dimensionality reduction methods; parametric and non-parametric statistical methods; Bayesian statistics; pattern recognition or classification methods 

  • Expert level fluency in statistical programming using Python, R/bioconductor or equivalents.  

  • Demonstrated ability to lead projects of moderate scope, mapping-out critical path, milestones and timelines, as well as manage expectations with minimal supervision.  

  • Demonstrated experience in deep learning and generative AI model assessment is a differentiator. 

  • Curiosity to dive below the surface and proactively identify critical issues including their tactical and strategic resolutions. 

  • Excellent oral and written communication 

Benefits we offer:   

HiFiBiO is committed to the health and well-being of our team members and offers a variety of benefits supporting our diverse employee base. All full-time employees are eligible for our comprehensive benefits package:  

  • Medical, Dental, and Vision insurance (Company covers 80% of the premium cost)  
  • Life, AD&D, Short-term, and Long-term Disability Insurance (100% company covers) 
  • Health Savings Account & Flexible Spending Account 
  • Telehealth Service (100% company covers)   
  • Dependent Care Pre-tax Account  
  • Parking and Commuter Pre-tax Account
  • Unlimited PTO (Paid Time Off)  
  • 10 Paid Holidays and Sick Time (40 hours per year)  
  • 401(K) Plan 


Notice and Directive to Recruiters and Staffing Agencies:
HiFiBiO Therapeutics has an internal recruiting capacity to fill open roles that are posted to the public. In some cases, HiFiBiO may engage with external recruiting vendors. Recruiting vendors are not authorized to send resumes or candidate information or otherwise directly or indirectly contact HiFiBiO employees for the purposes of presenting candidates without HiFiBiO’s prior written approval.

Only recruiting vendors who have an active and valid agreement on file with HiFiBiO which has been authorized by the HiFiBiO recruiting team can submit candidates for engaged open positions.

HiFiBiO will not pay any placement or other fees of any kind from unsolicited resumes or candidate information that is in violation of this Notice and Directive. Any resume submitted by an agency in the absence of a signed agreement will automatically become the property of HiFiBiO Therapeutics, and HiFiBiO Therapeutics will not owe any referral or other fees with respect thereto.

If you’re a candidate, please apply directly on our careers page for review and evaluation of your candidacy directly by HiFiBiO recruiting team.

Equal Opportunity Employer

We are an Equal Opportunity Employer. Applicants and employees are considered for positions and evaluated without regard to mental or physical disability, race, color, religion, gender, national origin, age, genetic information, military or veteran status, sexual orientation, gender identity, gender expression, transgender status, marital status or any other protected Federal/National, State/Province, or Local status unrelated to the performance of the work involved.

Notice to Search Firms/Third-Party Recruitment Agencies (Recruiters)

Our Human Resources team manages the recruitment and employment process for HiFiBiO Therapeutics. To protect the interests of all parties involved, HiFiBiO will only accept resumes from a recruiter if an executed search agreement directed to the particular position(s) is in place. Unsolicited resumes sent to HiFiBiO from recruiters do not constitute any type of relationship between the recruiter and HiFiBiO and do not obligate HiFiBiO in any way to pay any fees should we hire from those resumes. Recruiters are requested not to contact or present candidates directly to our hiring manager or employees; no response will be provided to such contact or presentation.

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